STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FNT1Urease, beta subunit. (259 aa)    
Predicted Functional Partners:
A0A1Y2FUF1
UreF-domain-containing protein.
 
 0.994
A0A1Y2F1Z5
Urease.
 
     0.948
A0A1Y2FFF1
Carbamoyl-phosphate synthase L chain, ATP binding domain-domain-containing protein.
     
 0.756
A0A1Y2FIF4
Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, which is a biosynthetic precursor of chitin and also supplies the amino sugars for N-linked oligosaccharides of glycoproteins. Belongs to the phosphohexose mutase family.
     
 0.750
A0A1Y2F5F4
Arabinogalactan endo-beta-1,4-galactanase; Belongs to the glycosyl hydrolase 53 family.
    
 0.606
BCR37DRAFT_195
Arginase; Belongs to the arginase family.
    
 0.606
A0A1Y2FWW8
CobW/HypB/UreG, nucleotide-binding domain-domain-containing protein.
 
     0.505
A0A1Y2FNE0
Galactose-binding domain-like protein.
    
  0.474
A0A1Y2F1P2
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
     
 0.455
A0A1Y2EVY4
Uncharacterized protein.
 
      0.443
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.