STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2FUP7Glycoside hydrolase superfamily. (525 aa)    
Predicted Functional Partners:
A0A1Y2FL66
1,4-alpha-glucan branching enzyme.
  
 
 0.881
A0A1Y2FS75
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.825
A0A1Y2FEV4
Glucanotransferase domain of glycogen debranching enzyme-domain-containing protein.
   
 0.792
A0A1Y2FUM6
Glycoside hydrolase superfamily.
 
   
 0.787
A0A1Y2F0F3
Glycoside hydrolase superfamily.
 
   
 0.741
A0A1Y2FB42
Amidase signature enzyme.
    
 0.729
A0A1Y2FGZ9
Amino acid transporter.
    
 0.729
A0A1Y2FUX5
Phospho-2-dehydro-3-deoxyheptonate aldolase; Belongs to the class-II DAHP synthase family.
    
 0.729
A0A1Y2FGM4
Ornithine carbamoyltransferase OTC/ARG3; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.643
A0A1Y2FDC2
Six-hairpin glycosidase-like protein.
    
 0.640
Your Current Organism:
Protomyces lactucaedebilis
NCBI taxonomy Id: 56484
Other names: NRRL YB-4353, P. lactucaedebilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.