STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GACE_0764Indoleyruvate:ferredoxin oxidoreductase beta subunit. (186 aa)    
Predicted Functional Partners:
GACE_0763
Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 
 0.945
GACE_0686
2-oxoacid ferredoxin oxidoreductase, subunit beta.
  
 
 0.893
GACE_0141
Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
 
 0.889
GACE_0695
Pyruvate ferredoxin oxidoreductase, beta subunit.
  
 
 0.878
GACE_1417
Pyruvate ferredoxin oxidoreductase, beta subunit.
  
 
 0.878
GACE_2155
2-ketoisovalerate ferredoxin oxidoreductase, beta subunit.
  
 
 0.878
GACE_0766
3-ketoacyl-CoA thiolase.
     
 0.834
GACE_0767
Hypothetical protein.
     
 0.825
GACE_0765
Cyclohex-1-ene-1-carboxyl-CoA hydratase, BadK; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.789
GACE_0687
2-oxoacid ferredoxin oxidoreductase, subunit alpha.
  
 
 0.781
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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