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pbpB protein (Brachyspira hyodysenteriae) - STRING interaction network
"pbpB" - Penicillin-binding protein 2 in Brachyspira hyodysenteriae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbpBPenicillin-binding protein 2 (870 aa)    
Predicted Functional Partners:
murG
N-acetylglucosaminyl transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) (358 aa)
   
 
    0.981
BHWA1_00921
Alpha-2-macroglobulin domain-containing protein (1908 aa)
 
   
  0.878
pbp3
Penicillin-binding protein 3 (634 aa)
   
   
    0.818
pbp1
Peptidoglycan synthesis transpeptidase (669 aa)
   
   
    0.817
BHWA1_01579
Penicillin binding protein (790 aa)
   
   
0.765
BHWA1_00340
Membrane carboxypeptidase (800 aa)
   
   
 
0.757
BHWA1_00816
Monogalactosyldiacylglycerol (MGDG) synthase (377 aa)
       
    0.703
BHWA1_00049
Hypothetical protein (251 aa)
              0.632
BHWA1_00450
Aminodeoxychorismate lyase (335 aa)
 
 
      0.618
BHWA1_01724
Peptidase (397 aa)
   
          0.581
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae, B. hyodysenteriae WA1, Brachyspira hyodysenteriae, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1, Serpula hyodysenteriae, Serpulina hyodysenteriae, Treponema hyodysenteriae
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