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BHWA1_00055 protein (Brachyspira hyodysenteriae) - STRING interaction network
"BHWA1_00055" - GTP-binding protein in Brachyspira hyodysenteriae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BHWA1_00055GTP-binding protein (397 aa)    
Predicted Functional Partners:
BHWA1_00056
Biotin synthase (373 aa)
     
  0.992
thiH
Thiamine biosynthesis protein (474 aa)
   
  0.988
BHWA1_00053
Hypothetical protein (83 aa)
 
          0.891
hymC
[Fe] hydrogenase large subunit HymC (582 aa)
 
   
  0.866
BHWA1_00793
Iron only hydrogenase large subunit, C-terminal domain-containing protein (490 aa)
 
   
  0.829
rplX
50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit (113 aa)
     
 
  0.769
rplA
50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (233 aa)
     
 
  0.764
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (187 aa)
     
 
  0.751
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (122 aa)
       
      0.733
pyrFE
Orotidine 5’-phosphate decarboxylase/orotate phosphoribosyltransferase (451 aa)
   
 
  0.637
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae, B. hyodysenteriae WA1, Brachyspira hyodysenteriae, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1, Serpula hyodysenteriae, Serpulina hyodysenteriae, Treponema hyodysenteriae
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