STRINGSTRING
pacL2 protein (Brachyspira hyodysenteriae) - STRING interaction network
"pacL2" - Cation transport ATPase in Brachyspira hyodysenteriae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pacL2Cation transport ATPase (878 aa)    
Predicted Functional Partners:
zntA
Cation transport ATPase ZntA (758 aa)
   
0.991
mgtC
MgtC family protein (261 aa)
   
  0.969
cadA
Cadmium-translocating P-type ATPase (645 aa)
   
0.917
pgi
Glucose-6-phosphate isomerase (443 aa)
   
    0.715
znuC
ABC-type Mn/Zn transport system ATPase ZnuC (246 aa)
   
   
    0.711
BHWA1_00042
Mn/Zn ABC transporter (275 aa)
         
  0.695
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (185 aa)
       
    0.675
BHWA1_01579
Penicillin binding protein (790 aa)
     
      0.665
BHWA1_00973
Succinate dehydrogenase/fumarate reductase flavoprotein subunit SdhA (223 aa)
   
      0.645
BHWA1_00232
TPR domain-containing protein (467 aa)
              0.592
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae, B. hyodysenteriae WA1, Brachyspira hyodysenteriae, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1, Serpula hyodysenteriae, Serpulina hyodysenteriae, Treponema hyodysenteriae
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