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ssuA protein (Brachyspira hyodysenteriae) - STRING interaction network
"ssuA" - ABC transporter periplasmic binding protein in Brachyspira hyodysenteriae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuAABC transporter periplasmic binding protein; Probably part of an ABC transporter complex (346 aa)    
Predicted Functional Partners:
BHWA1_00431
Nitrate/sulfonate/bicarbonate ABC transporter permease (278 aa)
 
          0.909
BHWA1_00433
ABC transporter (252 aa)
 
          0.899
ssuB
ABC transporter ATP-binding protein (250 aa)
 
          0.898
BHWA1_00432
Nitrate/sulfonate/taurine/bicarbonate ABC transporter permease (266 aa)
 
          0.877
BHWA1_00429
Sulfatase (474 aa)
 
          0.799
BHWA1_00322
Nitrate/sulfonate/bicarbonate ABC transporter (307 aa)
   
          0.688
BHWA1_00453
Hypothetical protein (7854 aa)
   
          0.684
BHWA1_00797
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein (337 aa)
   
          0.661
BHWA1_00805
Hypothetical protein (266 aa)
   
          0.651
BHWA1_01975
Hypothetical protein (257 aa)
   
          0.627
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae, B. hyodysenteriae WA1, Brachyspira hyodysenteriae, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1, Serpula hyodysenteriae, Serpulina hyodysenteriae, Treponema hyodysenteriae
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