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hsdR protein (Brachyspira hyodysenteriae) - STRING interaction network
"hsdR" - Type I site-specific deoxyribonuclease, HsdR family in Brachyspira hyodysenteriae
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdRType I site-specific deoxyribonuclease, HsdR family (1021 aa)    
Predicted Functional Partners:
BHWA1_00436
N-6 DNA methylase (500 aa)
 
   
  0.979
BHWA1_00438
Restriction modification system DNA specificity domain-containing protein (523 aa)
 
   
  0.970
BHWA1_00405
Type II restriction-modification enzyme (793 aa)
 
   
  0.852
mrr
Restriction system protein Mrr (294 aa)
         
  0.695
BHWA1_02562
R polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (309 aa)
       
 
  0.676
BHWA1_01263
DNA-directed RNA polymerase sigma-70/sigma-32 subunit RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (287 aa)
       
 
  0.676
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (587 aa)
       
 
  0.623
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (435 aa)
     
   
  0.599
BHWA1_01584
Metal-dependent hydrolase (232 aa)
 
          0.565
BHWA1_01821
ATPase (386 aa)
   
        0.496
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae, B. hyodysenteriae WA1, Brachyspira hyodysenteriae, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1, Serpula hyodysenteriae, Serpulina hyodysenteriae, Treponema hyodysenteriae
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