STRINGSTRING
lmp1 protein (Brachyspira hyodysenteriae) - STRING interaction network
"lmp1" - annotation not available in Brachyspira hyodysenteriae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lmp1annotation not available (453 aa)    
Predicted Functional Partners:
ACN83005.1
annotation not available (723 aa)
 
      0.931
ACN82739.1
annotation not available (400 aa)
   
      0.853
ACN85097.1
annotation not available (394 aa)
   
      0.843
ACN82745.1
annotation not available (395 aa)
   
      0.818
ACN83006.1
annotation not available (354 aa)
              0.811
ACN82979.1
annotation not available (328 aa)
   
 
  0.805
tar8
annotation not available (642 aa)
   
      0.803
ACN82747.1
annotation not available (975 aa)
   
 
 
  0.799
ACN83675.1
annotation not available (624 aa)
   
      0.799
ACN84689.1
annotation not available (479 aa)
   
 
      0.798
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae WA1, Brachyspira hyodysenteriae, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1
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