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BHWA1_00567 protein (Brachyspira hyodysenteriae) - STRING interaction network
"BHWA1_00567" - Lytic transglycosylase in Brachyspira hyodysenteriae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BHWA1_00567Lytic transglycosylase (749 aa)    
Predicted Functional Partners:
BHWA1_00966
TPR domain-containing protein (644 aa)
   
          0.638
BHWA1_00641
Hypothetical protein (2326 aa)
   
          0.626
ywdH
Aldehyde dehydrogenase ywdH (456 aa)
              0.605
BHWA1_01595
TPR domain-containing protein (712 aa)
   
          0.602
polA
DNA polymerase I (920 aa)
     
 
  0.598
xtmB
Phage terminase large subunit (456 aa)
   
        0.557
BHWA1_01287
Hypothetical protein (505 aa)
   
          0.540
BHWA1_00336
Hypothetical protein (340 aa)
   
          0.539
BHWA1_00247
Hypothetical protein (975 aa)
   
          0.539
rnhA
Ribonuclease H (163 aa)
     
      0.532
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae, B. hyodysenteriae WA1, Brachyspira hyodysenteriae, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1, Serpula hyodysenteriae, Serpulina hyodysenteriae, Treponema hyodysenteriae
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