STRINGSTRING
ttg2B protein (Brachyspira hyodysenteriae) - STRING interaction network
"ttg2B" - ABC transporter permease in Brachyspira hyodysenteriae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttg2BABC transporter permease (268 aa)    
Predicted Functional Partners:
BHWA1_00200
ABC transporter ATP-binding protein (259 aa)
 
 
  0.997
BHWA1_00201
Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component (260 aa)
 
   
    0.906
dnaB
DNA helicase, DnaB type; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity (466 aa)
   
        0.850
rplI
50S ribosomal protein L9; Binds to the 23S rRNA (166 aa)
              0.706
BHWA1_01372
Outer membrane protein (878 aa)
 
        0.622
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3’ invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA’s homology-searching function (462 aa)
 
        0.568
BHWA1_00739
Hypothetical protein (586 aa)
 
          0.568
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine (421 aa)
   
        0.545
BHWA1_02007
D-arabinose-5-phosphate isomerase (320 aa)
   
        0.524
yrbI
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (183 aa)
   
        0.498
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae, B. hyodysenteriae WA1, Brachyspira hyodysenteriae, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1, Serpula hyodysenteriae, Serpulina hyodysenteriae, Treponema hyodysenteriae
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