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glnK protein (Brachyspira hyodysenteriae) - STRING interaction network
"glnK" - Nitrogen regulatory protein PII in Brachyspira hyodysenteriae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnKNitrogen regulatory protein PII (115 aa)    
Predicted Functional Partners:
BHWA1_00835
Hypothetical protein (250 aa)
              0.617
purL
Phosphoribosylformylglycinamidine synthase (1248 aa)
              0.501
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (599 aa)
   
        0.497
rnhA
Ribonuclease H (163 aa)
   
        0.496
BHWA1_02562
R polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (309 aa)
              0.482
BHWA1_01263
DNA-directed RNA polymerase sigma-70/sigma-32 subunit RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (287 aa)
              0.482
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (587 aa)
              0.482
mscS
Mechanosensitive ion channel (345 aa)
   
        0.473
BHWA1_00833
Aldo/keto reductase (285 aa)
              0.415
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae, B. hyodysenteriae WA1, Brachyspira hyodysenteriae, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1, Serpula hyodysenteriae, Serpulina hyodysenteriae, Treponema hyodysenteriae
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