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STRINGSTRING
bitE protein (Brachyspira hyodysenteriae) - STRING interaction network
"bitE" - annotation not available in Brachyspira hyodysenteriae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bitEannotation not available (549 aa)    
Predicted Functional Partners:
bitD
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system (374 aa)
 
  0.997
bitC
annotation not available (339 aa)
 
 
  0.995
ACN83361.1
annotation not available (342 aa)
 
 
  0.993
bitA
annotation not available (323 aa)
 
 
  0.992
ACN83359.1
annotation not available (324 aa)
 
 
  0.991
ACN85023.1
annotation not available (339 aa)
 
 
  0.989
ACN85024.1
annotation not available (347 aa)
 
 
  0.988
ACN85022.1
annotation not available (554 aa)
   
   
 
0.802
ftsQ
Cell division protein FtsQ; Essential cell division protein (254 aa)
       
 
  0.521
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (636 aa)
     
      0.501
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae WA1, Brachyspira hyodysenteriae, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1
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