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yrbI protein (Brachyspira hyodysenteriae) - STRING interaction network
"yrbI" - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase in Brachyspira hyodysenteriae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
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[Homology]
Score
yrbI3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (183 aa)    
Predicted Functional Partners:
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase (271 aa)
   
  0.997
kdsB
3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria (256 aa)
 
  0.995
BHWA1_02007
D-arabinose-5-phosphate isomerase (320 aa)
 
   
  0.950
kdtA
3-Deoxy-D-manno-oct-2-ulosonic acid transferase (420 aa)
 
 
  0.903
spsE
Sialic acid synthase SpsE (344 aa)
 
   
  0.863
BHWA1_00881
Hypothetical protein (187 aa)
              0.859
BHWA1_00679
RfaE, ADP-heptose synthase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose (153 aa)
 
        0.788
lpxB
Lipid A disaccharide synthase LpxB; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell (376 aa)
 
 
  0.766
BHWA1_00880
Hypothetical protein (431 aa)
              0.759
BHWA1_00147
Lytic transglycosylase (447 aa)
 
   
  0.747
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae, B. hyodysenteriae WA1, Brachyspira hyodysenteriae, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1, Serpula hyodysenteriae, Serpulina hyodysenteriae, Treponema hyodysenteriae
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