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rpsF protein (Brachyspira hyodysenteriae) - STRING interaction network
"rpsF" - 30S ribosomal protein S6 in Brachyspira hyodysenteriae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpsF30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (116 aa)    
Predicted Functional Partners:
ssb
Single-stranded DNA-binding protein (142 aa)
              0.829
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (111 aa)
              0.697
BHWA1_01581
Hypothetical protein (126 aa)
   
          0.539
BHWA1_00084
Hypothetical protein (142 aa)
   
          0.521
BHWA1_00532
Periplasmic protein (142 aa)
   
          0.513
BHWA1_01647
Periplasmic protein (200 aa)
   
          0.486
BHWA1_02559
Hypothetical protein (140 aa)
   
          0.482
BHWA1_00565
Periplasmic protein (132 aa)
   
          0.481
BHWA1_02083
Hypothetical protein (143 aa)
   
          0.479
BHWA1_01185
Hypothetical protein (143 aa)
   
          0.464
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae, B. hyodysenteriae WA1, Brachyspira hyodysenteriae, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1, Serpula hyodysenteriae, Serpulina hyodysenteriae, Treponema hyodysenteriae
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