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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
tmpB protein (Brachyspira hyodysenteriae) - STRING interaction network
"tmpB" - annotation not available in Brachyspira hyodysenteriae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmpBannotation not available (472 aa)    
Predicted Functional Partners:
ACN83996.1
annotation not available (598 aa)
   
          0.780
ACN82739.1
annotation not available (400 aa)
   
          0.778
ACN82745.1
annotation not available (395 aa)
   
          0.776
ACN85081.1
annotation not available (232 aa)
   
          0.775
ACN85097.1
annotation not available (394 aa)
   
          0.773
ACN83968.1
annotation not available (565 aa)
   
          0.771
ACN83288.1
annotation not available (472 aa)
   
          0.770
treP
annotation not available (882 aa)
 
          0.766
ACN83495.1
annotation not available (440 aa)
   
        0.764
ACN83766.1
annotation not available (505 aa)
   
          0.764
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae WA1, Brachyspira hyodysenteriae, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1
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