STRINGSTRING
ACN85133.1 protein (Brachyspira hyodysenteriae) - STRING interaction network
"ACN85133.1" - annotation not available in Brachyspira hyodysenteriae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN85133.1annotation not available (367 aa)    
Predicted Functional Partners:
ACN85131.1
annotation not available (286 aa)
 
     
  0.839
rfbF
annotation not available (261 aa)
 
          0.827
ACN85132.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3’ and C5’positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose; Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family (177 aa)
         
  0.794
ACN85126.1
annotation not available (275 aa)
   
          0.634
nifU
Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (277 aa)
         
  0.541
ACN85127.1
annotation not available (406 aa)
   
          0.505
ACN84911.1
annotation not available (251 aa)
     
      0.491
ACN85125.1
annotation not available (334 aa)
   
          0.450
ACN85128.1
annotation not available (333 aa)
   
          0.442
cdsM
annotation not available (247 aa)
              0.421
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae WA1, Brachyspira hyodysenteriae, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1
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