STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
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[Homology]
Score
EED34383.1[G] COG2133 Glucose/sorbosone dehydrogenases. (470 aa)    
Predicted Functional Partners:
EED34486.1
Alcohol dehydrogenase (acceptor); [S] COG1520 FOG: WD40-like repeat.
  
  
 0.659
korA
2-ketoglutarate: nadp oxidoreductase,alpha subunit; [C] COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
     
  0.603
EED34623.1
Dehydrogenase/transketolase family protein; [C] COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.
   
 
  0.578
pvaA_2
Putative PQQ-dependent polyvinyl alcohol dehydrogenase; [S] COG1520 FOG: WD40-like repeat.
  
  
 0.567
EED35931.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit; riken cdna 0610011f06; EC_number=2.1.1.48.
       0.555
pvaA_1
Putative PQQ-dependent polyvinyl alcohol dehydrogenase; [G] COG4993 Glucose dehydrogenase.
  
  
 0.548
EED36343.1
Pyrrolo-quinoline quinone; [G] COG4993 Glucose dehydrogenase.
  
  
 0.548
EED36698.1
Pyrrolo-quinoline quinone; [S] COG1520 FOG: WD40-like repeat.
  
  
 0.538
EED36622.1
Quinoprotein glucose dehydrogenase-A; [G] COG4993 Glucose dehydrogenase.
  
 
  0.509
EED34472.1
Pyrrolo-quinoline quinone; [G] COG4993 Glucose dehydrogenase.
  
 
  0.481
Your Current Organism:
Luminiphilus syltensis
NCBI taxonomy Id: 565045
Other names: L. syltensis NOR5-1B, Luminiphilus syltensis NOR5-1B, gamma proteobacterium Ivo14
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