STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_36_0260Putative xylulokinase; Belongs to the FGGY kinase family. (487 aa)    
Predicted Functional Partners:
LMJF_35_3680
Putative ribulose-phosphate 3-epimerase.
   
 0.931
LMJF_33_1570
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
   
 0.930
LMJF_32_2820
Putative proteasome regulatory non-ATP-ase subunit.
   
 0.798
LMJF_21_0760
19S proteasome regulatory subunit.
   
 0.772
LMJF_02_0370
Putative proteasome regulatory non-ATPase subunit 6.
   
 0.763
LMJF_27_1460
Putative proteasome regulatory non-ATP-ase subunit 3.
   
 0.762
LMJF_07_1120
Putative proteasome regulatory non-ATP-ase subunit.
   
 0.759
LMJF_29_0120
Putative proteasome regulatory non-ATPase subunit.
   
 0.757
LMJF_19_1120
Putative proteasome regulatory non-ATP-ase subunit.
   
 0.751
LMJF_21_1700
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.732
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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