STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_33_0130Putative trans-splicing factor. (341 aa)    
Predicted Functional Partners:
LMJF_15_1470
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.974
LMJF_01_0560
Uncharacterized protein.
   
 0.968
LMJF_32_2200
Small nuclear ribonucleoprotein component-like protein.
   
 0.957
LMJF_25_1705
Sm domain-containing protein.
    
 0.947
L7836.07
Putative spliceosomal U5 snRNP-specific protein.
    
 0.943
LMJF_30_1205
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.942
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.938
LMJF_32_1070
Putative small nuclear ribonucleoprotein.
    
  0.929
LMJF_33_3190
Small nuclear ribonucleoprotein Sm D2.
    
 0.926
LMJF_22_1060
Putative small nuclear ribonucleoprotein.
    
 0.924
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.