STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_30_3130Putative valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (967 aa)    
Predicted Functional Partners:
LMJF_12_0360
Uncharacterized protein.
   
 
 0.999
ILERS
Putative isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
0.912
LMJF_26_0010
Brix domain containing-like protein.
 
 
  
 0.905
LMJF_13_1100
Putative leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.900
LMJF_18_1220
Putative prolyl-tRNA synthetase.
  
 
 0.889
LMJF_16_1130
Tyrosyl or methionyl-tRNA synthetase-like protein.
  
 
 0.889
LMJF_22_1540
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 0.846
LMJF_35_1410
Putative threonyl-tRNA synthetase.
  
  
 0.836
LMJF_22_0110
Putative GMP synthase.
  
  
 0.826
LMJF_11_0100
Putative seryl-tRNA synthetase.
  
  
 0.826
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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