STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_16_1360Amidase domain-containing protein. (599 aa)    
Predicted Functional Partners:
LMJF_18_1220
Putative prolyl-tRNA synthetase.
  
 
 0.960
LMJF_30_3240
Putative glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.817
LMJF_16_1170
Putative 60S ribosomal protein L39.
  
 
 0.817
LMJF_15_1440
Putative glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.817
LMJF_16_1130
Tyrosyl or methionyl-tRNA synthetase-like protein.
  
 
 0.677
LMJF_32_2240
Putative methionyl-tRNA formyltransferase.
  
  
 0.675
LMJF_34_2340
Putative asparaginyl-tRNA synthetase.
   
 
 0.660
LMJF_30_0460
Putative aspartyl-tRNA synthetase.
   
 
 0.660
LMJF_21_0895
Putative aspartyl-tRNA synthetase.
   
 
 0.660
LMJF_16_0550
Putative OMPDCase-OPRTase.
  
    0.656
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.