STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_16_0650RING-type domain-containing protein. (105 aa)    
Predicted Functional Partners:
LMJF_35_3750
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.980
LMJF_30_1990
Cyclosome subunit-like protein.
    
 0.980
LMJF_30_0710
Putative CDC16.
    
 0.980
LMJF_12_0610
TPR_REGION domain-containing protein.
    
 0.974
LMJF_05_0410
TPR_REGION domain-containing protein.
    
 0.952
LMJF_04_0400
Anaphase promoting complex, subunit 10-like protein.
    
 0.952
LMJF_24_2130
Putative ubiquitin-conjugating enzyme e2; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.922
LMJF_15_0710
Uncharacterized protein.
    
 0.901
LMJF_09_1140
Uncharacterized protein.
    
 0.901
LMJF_35_4500
Putative anaphase promoting complex subunit protein.
     
  0.900
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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