STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LINJ_36_1960Uncharacterized protein. (633 aa)    
Predicted Functional Partners:
LINJ_18_1600
Uncharacterized protein.
   
 
 0.999
LINJ_33_2530
Putative ras-like small GTPases.
   
 
 0.998
LINJ_20_1640
Putative ribosome biogenesis protein.
   
 
 0.997
LINJ_33_1970
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.997
LINJ_04_0810
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.996
LINJ_10_1110
RNA-binding protein-like protein.
   
 
 0.996
LinJ11.0410
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 
 0.996
LINJ_31_0210
WD_REPEATS_REGION domain-containing protein.
   
 
 0.996
LINJ_22_1230
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 
 0.995
LINJ_35_1810
Uncharacterized protein.
   
 
 0.992
Your Current Organism:
Leishmania infantum
NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum
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