Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LINJ_04_0810 | LINJ_10_1110 | A4HS78 | A4HUL4 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | RNA-binding protein-like protein. | 0.998 |
LINJ_04_0810 | LINJ_18_1600 | A4HS78 | A4HY31 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.999 |
LINJ_04_0810 | LINJ_20_1640 | A4HS78 | A4HYZ6 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Putative ribosome biogenesis protein. | 0.997 |
LINJ_04_0810 | LINJ_22_1230 | A4HS78 | E9AH06 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Protein MAK16 homolog; Belongs to the MAK16 family. | 0.989 |
LINJ_04_0810 | LINJ_31_0210 | A4HS78 | A4I6B2 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | WD_REPEATS_REGION domain-containing protein. | 0.999 |
LINJ_04_0810 | LINJ_33_1970 | A4HS78 | A4I949 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.999 |
LINJ_04_0810 | LINJ_33_2530 | A4HS78 | E9AHQ8 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Putative ras-like small GTPases. | 0.999 |
LINJ_04_0810 | LINJ_35_1810 | A4HS78 | A4IB82 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.999 |
LINJ_04_0810 | LINJ_36_1960 | A4HS78 | A4IDF9 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.996 |
LINJ_04_0810 | LinJ11.0410 | A4HS78 | A4HUV2 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.999 |
LINJ_10_1110 | LINJ_04_0810 | A4HUL4 | A4HS78 | RNA-binding protein-like protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.998 |
LINJ_10_1110 | LINJ_18_1600 | A4HUL4 | A4HY31 | RNA-binding protein-like protein. | Uncharacterized protein. | 0.998 |
LINJ_10_1110 | LINJ_20_1640 | A4HUL4 | A4HYZ6 | RNA-binding protein-like protein. | Putative ribosome biogenesis protein. | 0.999 |
LINJ_10_1110 | LINJ_22_1230 | A4HUL4 | E9AH06 | RNA-binding protein-like protein. | Protein MAK16 homolog; Belongs to the MAK16 family. | 0.995 |
LINJ_10_1110 | LINJ_31_0210 | A4HUL4 | A4I6B2 | RNA-binding protein-like protein. | WD_REPEATS_REGION domain-containing protein. | 0.998 |
LINJ_10_1110 | LINJ_33_1970 | A4HUL4 | A4I949 | RNA-binding protein-like protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.999 |
LINJ_10_1110 | LINJ_33_2530 | A4HUL4 | E9AHQ8 | RNA-binding protein-like protein. | Putative ras-like small GTPases. | 0.999 |
LINJ_10_1110 | LINJ_35_1810 | A4HUL4 | A4IB82 | RNA-binding protein-like protein. | Uncharacterized protein. | 0.998 |
LINJ_10_1110 | LINJ_36_1960 | A4HUL4 | A4IDF9 | RNA-binding protein-like protein. | Uncharacterized protein. | 0.996 |
LINJ_10_1110 | LinJ11.0410 | A4HUL4 | A4HUV2 | RNA-binding protein-like protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.997 |
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