Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYSB | LINJ_07_0240 | A4HX92 | A4HT60 | Cystathionine beta-synthase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.960 |
CYSB | LINJ_28_0410 | A4HX92 | A4I3B1 | Cystathionine beta-synthase. | Phosphoadenosine phosphosulfate reductase-like protein. | 0.674 |
CYSB | LINJ_28_1350 | A4HX92 | A4I3K3 | Cystathionine beta-synthase. | Putative p450 reductase. | 0.727 |
CYSB | LINJ_30_0630 | A4HX92 | A4I589 | Cystathionine beta-synthase. | Putative nitrate reductase. | 0.747 |
CYSB | LINJ_36_3750 | A4HX92 | A4ID39 | Cystathionine beta-synthase. | Cysteine synthase. | 0.834 |
CYSB | LINJ_36_6570 | A4HX92 | A4IE37 | Cystathionine beta-synthase. | Putative homocysteine S-methyltransferase. | 0.965 |
LINJ_07_0240 | CYSB | A4HT60 | A4HX92 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Cystathionine beta-synthase. | 0.960 |
LINJ_07_0240 | LINJ_28_1350 | A4HT60 | A4I3K3 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Putative p450 reductase. | 0.610 |
LINJ_07_0240 | LINJ_36_3750 | A4HT60 | A4ID39 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Cysteine synthase. | 0.886 |
LINJ_07_0240 | LINJ_36_6570 | A4HT60 | A4IE37 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Putative homocysteine S-methyltransferase. | 0.942 |
LINJ_23_0300 | LINJ_28_1350 | A4I066 | A4I3K3 | Putative argininosuccinate synthase. | Putative p450 reductase. | 0.521 |
LINJ_23_0300 | LINJ_30_0630 | A4I066 | A4I589 | Putative argininosuccinate synthase. | Putative nitrate reductase. | 0.421 |
LINJ_23_0300 | LINJ_31_1650 | A4I066 | A4I6U0 | Putative argininosuccinate synthase. | Uncharacterized protein. | 0.679 |
LINJ_28_0410 | CYSB | A4I3B1 | A4HX92 | Phosphoadenosine phosphosulfate reductase-like protein. | Cystathionine beta-synthase. | 0.674 |
LINJ_28_0410 | LINJ_28_1350 | A4I3B1 | A4I3K3 | Phosphoadenosine phosphosulfate reductase-like protein. | Putative p450 reductase. | 0.812 |
LINJ_28_0410 | LINJ_30_0630 | A4I3B1 | A4I589 | Phosphoadenosine phosphosulfate reductase-like protein. | Putative nitrate reductase. | 0.721 |
LINJ_28_0410 | LINJ_36_3750 | A4I3B1 | A4ID39 | Phosphoadenosine phosphosulfate reductase-like protein. | Cysteine synthase. | 0.674 |
LINJ_28_1350 | CYSB | A4I3K3 | A4HX92 | Putative p450 reductase. | Cystathionine beta-synthase. | 0.727 |
LINJ_28_1350 | LINJ_07_0240 | A4I3K3 | A4HT60 | Putative p450 reductase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.610 |
LINJ_28_1350 | LINJ_23_0300 | A4I3K3 | A4I066 | Putative p450 reductase. | Putative argininosuccinate synthase. | 0.521 |
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