STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109993145Leucine rich repeat containing 34. (421 aa)    
Predicted Functional Partners:
LOC109994110
Fleer.
   
    0.808
rsph14
Uncharacterized protein.
    
 
 0.660
ENSLBEP00000015047
Uncharacterized protein.
    
 
 0.644
ENSLBEP00000026691
DLEC1 cilia and flagella associated protein.
    
 0.632
cfap161
Cilia and flagella associated protein 161.
   
  
 0.590
ccdc65
NYD-SP28 domain-containing protein.
    
 
 0.576
lrrc23
Leucine rich repeat containing 23.
   
  
 0.566
LYPD6
LY6/PLAUR domain containing 6.
      
 0.552
ENSLBEP00000026370
Uncharacterized protein.
    
 
 0.551
dnpep
Aspartyl aminopeptidase; Belongs to the peptidase M18 family.
      
 0.549
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.