STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000033705Galectin. (281 aa)    
Predicted Functional Partners:
LOC109986247
Galectin.
    
 
0.633
lgals1
Galectin.
   
 0.497
gemin4
Gem (nuclear organelle) associated protein 4.
    
 
 0.496
lamp2
Lysosomal-associated membrane protein 2.
   
 0.482
ptprc
Protein tyrosine phosphatase receptor type C.
    
 
 0.479
cd4
CD4-1 molecule.
    
 0.478
lamp1
Lysosomal associated membrane protein 1a.
    
 0.473
LOC110002577
Uncharacterized protein.
    
 0.473
LOC109983613
Ig-like domain-containing protein.
    
 0.471
LOC109995152
Lysosomal associated membrane protein 1b.
    
 0.448
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.