STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_01141Glycosyltransferase. (387 aa)    
Predicted Functional Partners:
SYN_01142
Glycosyltransferase.
 
     0.938
SYN_01140
Acetyltransferase.
  
  
 0.789
SYN_01139
Hypothetical cytosolic protein.
       0.773
SYN_01131
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.663
SYN_01101
Glycosyltransferase.
  
     0.651
SYN_01144
Glycosyltransferase.
 
     0.648
SYN_00817
Glycosyltransferase.
  
     0.611
SYN_00823
Glycosyltransferase.
  
     0.541
SYN_02257
1,4-alpha-glucan branching enzyme.
   
 0.506
SYN_01143
Hypothetical cytosolic protein.
       0.495
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.