STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_01186Iron-sulfur cluster and nucleotide-binding protein. (297 aa)    
Predicted Functional Partners:
SYN_01188
Dinitrogenase iron-molybdenum cofactor protein.
 
  
 0.880
SYN_01179
Dinitrogenase iron-molybdenum cofactor protein.
 
  
 0.814
SYN_01180
Dinitrogenase iron-molybdenum cofactor protein.
  
 0.779
SYN_01177
Metallo-beta-lactamase superfamily protein.
 
     0.772
SYN_01170
Hypothetical cytosolic protein.
 
     0.761
SYN_01187
Iron-sulfur cluster and nucleotide-binding protein.
 
  
0.717
SYN_01185
Iron-sulfur cluster assembly/repair protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
 
 
 0.656
SYN_01189
Hypothetical cytosolic protein.
 
  
 0.579
SYN_01171
Hypothetical cytosolic protein.
 
  
 0.566
SYN_01173
Radical SAM superfamily protein.
 
     0.556
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.