STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_02419Aldehyde dehydrogenase (ferredoxin), chain A. (678 aa)    
Predicted Functional Partners:
SYN_02420
Ferredoxin.
 
 
 0.965
SYN_00260
4Fe-4S protein.
 
 
 0.900
SYN_03219
4Fe-4S protein.
 
 
 0.900
SYN_01376
4Fe-4S protein.
 
 
 0.855
SYN_01642
4Fe-4S protein.
 
 
 0.855
SYN_00562
Acetyltransferase (GNAT) family protein.
  
     0.752
SYN_01678
Acetyltransferase (GNAT) family protein.
  
     0.748
bamA
enoyl-CoA hydratase/isomerase family protein; Involved in the central benzoyl-CoA catabolism. Catalyzes the addition of one molecule of water to the double bond and the hydrolytic cleavage of C-C bond in the alicyclic ring, 6-oxocyclohex-1-ene-1- carbonyl-CoA (6-OCH-CoA) to yield 3-hydroxypimelyl-CoA.
  
     0.737
SYN_02421
Fe-S oxidoreductase.
 
 
   0.725
SYN_02418
Lactoylglutathione related lyase.
 
     0.714
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.