STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_02653Methyltransferase. (380 aa)    
Predicted Functional Partners:
SYN_02654
Putative cephalosporin hydroxylase.
 
     0.950
SYN_02649
Glucose-1-phosphate cytidylyltransferase.
 
  
 0.918
SYN_02652
CDP-4-dehydro-6-deoxy-D-gulose 4-reductase.
 
   
 0.918
SYN_02650
CDP-4-dehydro-6-deoxy-D-glucose 3-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.878
SYN_02648
CDP-glucose 4,6-dehydratase.
 
   
 0.860
SYN_02651
Methyltransferase.
 
    
0.841
SYN_02647
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.735
SYN_02655
ABC-type polysaccharide/polyol phosphate export systems, permease component.
     
 0.616
SYN_02656
ABC-type polysaccharide/polyol phosphate transport protein, ATPase component.
     
 0.616
SYN_02659
Glycosyltransferase.
 
  
 0.450
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.