STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYN_02854Alpha-amylase. (901 aa)    
Predicted Functional Partners:
SYN_02257
1,4-alpha-glucan branching enzyme.
 
 
 0.994
SYN_00879
Glycogen synthase /glycogen phosphorylase; Bifunctional.
 
 
 0.991
SYN_00298
Glycogen phosphorylase.
 
 
 0.983
SYN_00231
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 
 0.981
SYN_01331
Glycogen phosphorylase.
 
 
 0.980
SYN_02761
Glycogen phosphorylase.
 
 
 0.980
SYN_02880
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 
 0.980
SYN_01069
4-alpha-glucanotransferase.
  
 
 0.949
SYN_00880
Alpha-amylase.
 
 
 
0.933
SYN_00295
Glycogen debranching enzyme/alpha-amylase.
 
  
 0.855
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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