STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gomGCannotation not available (106 aa)    
Predicted Functional Partners:
comGA
annotation not available
       0.845
gomGB
annotation not available
       0.845
LGG_00990
annotation not available
       0.845
NP51_03160
annotation not available
       0.845
NP51_03155
annotation not available
       0.845
NP51_03150
annotation not available
       0.845
Your Current Organism:
Lactobacillus rhamnosus
NCBI taxonomy Id: 568703
Other names: L. rhamnosus GG, Lactobacillus rhamnosus, Lactobacillus rhamnosus ATCC 53103, Lactobacillus rhamnosus GG, Lactobacillus rhamnosus LMG 18243, Lactobacillus rhamnosus TNO 2012.09, Lactobacillus rhamnosus str. GG, Lactobacillus rhamnosus strain GG
Server load: low (9%) [HD]