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Acin_0038 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0038" - Sialic acid-binding periplasmic protein siaP in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0038Sialic acid-binding periplasmic protein siaP (358 aa)    
Predicted Functional Partners:
Acin_0037
Hypothetical protein (432 aa)
   
  0.957
dctQ
TRAP dicarboxylate transporter (184 aa)
 
   
  0.949
Acin_2271
Hypothetical protein (634 aa)
   
  0.874
Acin_2272
Putative C4-dicarboxylater TRAP-T family tripartite ATP-independent periplasmic transporter membrane protein, small subunit (163 aa)
 
   
  0.862
Acin_0039
Hypothetical protein (295 aa)
 
          0.768
Acin_2114
TRAP dicarboxylate transporter (157 aa)
 
          0.722
Acin_0035
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) (287 aa)
 
          0.659
Acin_0040
Hypothetical protein (310 aa)
 
     
  0.641
Acin_0034
Hypothetical protein (268 aa)
 
          0.614
polA
DNA polymerase I (873 aa)
           
  0.612
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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