STRINGSTRING
Acin_0045 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0045" - Transcriptional regulator in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0045Transcriptional regulator (309 aa)    
Predicted Functional Partners:
Acin_2431
Transcriptional regulator (314 aa)
   
          0.769
Acin_0126
lysR-family transcriptional regulator (350 aa)
   
          0.762
Acin_1737
Hypothetical protein (288 aa)
   
          0.686
Acin_0714
Hypothetical protein (308 aa)
   
   
  0.573
Acin_0974
Hypothetical protein (309 aa)
   
   
  0.564
Acin_0711
Hypothetical protein (311 aa)
   
   
  0.563
Acin_2455
Hypothetical protein (462 aa)
   
          0.520
Acin_0034
Hypothetical protein (268 aa)
   
          0.512
Acin_2123
Hypothetical protein (269 aa)
   
   
  0.490
Acin_2285
Transcriptional regulator (331 aa)
       
 
  0.480
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
Server load: low (6%) [HD]