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ttuD protein (Acidaminococcus intestini) - STRING interaction network
"ttuD" - Hydroxypyruvate reductase in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttuDHydroxypyruvate reductase (409 aa)    
Predicted Functional Partners:
Acin_2227
FAD linked oxidase domain protein (473 aa)
   
 
    0.809
Acin_1812
FAD-linked oxidase (466 aa)
   
 
    0.809
Acin_0227
FAD-linked oxidase (467 aa)
   
 
    0.809
Acin_0051
Small-conductance mechanosensitive channel protein (351 aa)
              0.601
pgk
Phosphoglycerate kinase (641 aa)
           
  0.531
Acin_0053
Hypothetical protein (442 aa)
   
        0.519
Acin_0055
Hypothetical protein (151 aa)
              0.493
Acin_0054
Hypothetical protein (264 aa)
              0.493
Acin_0870
Glyoxylate reductase (319 aa)
 
   
  0.478
Acin_0050
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate (169 aa)
              0.473
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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