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Acin_0072 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0072" - NAD-dependent epimerase/dehydratase in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0072NAD-dependent epimerase/dehydratase (326 aa)    
Predicted Functional Partners:
ugd
UDPglucose 6-dehydrogenase (411 aa)
   
 
  0.948
wbpO
Nucleotide sugar dehydrogenase (443 aa)
   
 
  0.689
Acin_0073
Hypothetical protein (65 aa)
              0.665
rfbD
dTDP-4-dehydrorhamnose reductase (309 aa)
   
 
  0.592
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase (208 aa)
 
 
  0.580
rpoD
RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (582 aa)
   
 
  0.545
wecB
UDP-N-acetylglucosamine 2-epimerase (386 aa)
   
   
  0.543
Acin_1637
Thioredoxin reductase (558 aa)
   
 
  0.532
Acin_2351
UDP-glucose 4-epimerase (328 aa)
   
 
0.507
Acin_0969
Thioredoxin (105 aa)
   
 
  0.502
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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