STRINGSTRING
Acin_0075 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0075" - Hypothetical protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0075Hypothetical protein (592 aa)    
Predicted Functional Partners:
Acin_2454
Sulfatase (594 aa)
   
   
0.830
Acin_2159
Hypothetical protein (677 aa)
 
     
  0.754
Acin_0730
Hypothetical protein (319 aa)
 
          0.660
Acin_0074
Transposase (410 aa)
              0.653
Acin_0011
Hypothetical protein (155 aa)
   
          0.628
Acin_0497
Hypothetical protein (167 aa)
   
          0.611
Acin_0065
Sulfatase (636 aa)
 
     
  0.579
Acin_0664
Hypothetical protein (866 aa)
   
          0.577
Acin_0668
Autotransporter (424 aa)
   
          0.570
Acin_0662
Autotransporter (424 aa)
   
          0.557
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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