STRINGSTRING
gspE protein (Acidaminococcus intestini) - STRING interaction network
"gspE" - General secretory pathway protein E in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspEGeneral secretory pathway protein E (436 aa)    
Predicted Functional Partners:
Acin_0088
Type II and III secretion system protein (424 aa)
 
   
  0.950
gspF
Hypothetical protein (395 aa)
 
 
  0.930
Acin_0527
Late competence protein comEA (210 aa)
   
   
  0.653
Acin_0089
Hypothetical protein (166 aa)
              0.609
Acin_0091
Hypothetical protein (210 aa)
              0.580
cinA
Competence/damage-inducible protein cinA (413 aa)
         
  0.551
Acin_0407
Magnesiumchelatase (508 aa)
 
          0.459
ftsZ
Cell division protein ftsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity (375 aa)
         
  0.429
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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