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Acin_0126 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0126" - lysR-family transcriptional regulator in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0126lysR-family transcriptional regulator (350 aa)    
Predicted Functional Partners:
Acin_2113
lysR-family transcriptional regulator (323 aa)
   
          0.771
Acin_0546
Transcriptional regulator (293 aa)
   
          0.769
Acin_2431
Transcriptional regulator (314 aa)
   
          0.767
Acin_0045
Transcriptional regulator (309 aa)
   
          0.762
Acin_1740
Transcriptional regulator (294 aa)
   
          0.757
Acin_0127
Citrate transporter (431 aa)
              0.649
Acin_1053
Transcriptional regulator (281 aa)
 
          0.586
Acin_2393
Transcriptional regulator (315 aa)
   
          0.538
Acin_0714
Hypothetical protein (308 aa)
   
   
  0.523
Acin_0711
Hypothetical protein (311 aa)
   
   
  0.506
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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