STRINGSTRING
livH protein (Acidaminococcus intestini) - STRING interaction network
"livH" - Inner-membrane translocator in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livHInner-membrane translocator (321 aa)    
Predicted Functional Partners:
livM
Inner-membrane translocator (315 aa)
 
  0.999
livG
ABC branched-chain amino acid transporter (261 aa)
 
  0.995
livF
ABC branched-chain amino acid transporter (234 aa)
 
  0.995
livK
Extracellular ligand-binding receptor (415 aa)
 
 
  0.980
Acin_0139
Acetoin utilization protein acuB (222 aa)
 
     
  0.890
Acin_0140
Hypothetical protein (53 aa)
              0.703
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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