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Acin_0166 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0166" - ABC-2 type transporter in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0166ABC-2 type transporter (369 aa)    
Predicted Functional Partners:
Acin_0165
ATP-binding protein (582 aa)
  0.993
Acin_0164
Secretion protein (350 aa)
 
        0.970
Acin_0167
Inner-membrane transport permease ybhR (371 aa)
 
       
0.898
Acin_0163
RND efflux system outer membrane lipoprotein (535 aa)
 
   
  0.898
Acin_1445
ABC transporter (259 aa)
  0.807
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (79 aa)
              0.496
Acin_0161
Single-strand DNA binding protein (75 aa)
              0.477
queF
GTP cyclohydrolase I; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) (154 aa)
   
        0.412
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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