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Acin_0170 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0170" - 3-methylitaconate isomerase in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_01703-methylitaconate isomerase (385 aa)    
Predicted Functional Partners:
Acin_0171
Hypothetical protein (757 aa)
   
   
  0.818
prpB
Carboxyvinyl-carboxyphosphonate phosphorylmutase (289 aa)
 
   
  0.762
aphB
lysR-family transcriptional regulator (287 aa)
         
  0.686
Acin_1756
Dimethylmenaquinone methyltransferase (248 aa)
 
          0.605
Acin_0172
Dicarboxylate carrier protein (417 aa)
 
          0.590
Acin_1552
Propionate catabolism protein (450 aa)
 
   
  0.568
Acin_1201
Aconitate hydratase domain protein (766 aa)
 
   
  0.507
Acin_0173
6-phosphogluconolactonase (348 aa)
              0.455
Acin_0596
Aconitate hydratase (649 aa)
   
   
  0.444
Acin_0174
Oxaloacetate decarboxylase (463 aa)
              0.405
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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