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fadD protein (Acidaminococcus intestini) - STRING interaction network
"fadD" - Long-chain fatty-acid CoA ligase in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadDLong-chain fatty-acid CoA ligase (499 aa)    
Predicted Functional Partners:
Acin_0720
acyl-CoA dehydrogenase (384 aa)
 
  0.954
Acin_2364
Aldehyde dehydrogenase (454 aa)
 
  0.933
Acin_0724
Aldehyde dehydrogenase (495 aa)
 
  0.922
Acin_0441
Hypothetical protein (442 aa)
 
   
 
0.862
Acin_0218
Hypothetical protein (270 aa)
              0.859
Acin_0489
butyryl-CoA dehydrogenase (591 aa)
 
 
  0.767
fruA
PTS system protein (636 aa)
       
 
  0.635
Acin_0216
Thioesterase (131 aa)
              0.606
Acin_0473
acyl-CoA dehydrogenase (377 aa)
 
 
  0.566
Acin_0219
Hypothetical protein (132 aa)
              0.563
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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