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hutU protein (Acidaminococcus intestini) - STRING interaction network
"hutU" - Urocanate hydratase in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutUUrocanate hydratase (682 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase (416 aa)
 
 
  0.998
hutH
Histidine ammonia-lyase (520 aa)
 
  0.996
Acin_0285
Histidine ammonia-lyase (508 aa)
 
  0.992
Acin_0279
Glutamate formiminotransferase (301 aa)
 
   
  0.848
Acin_0291
Transcriptional activator (1023 aa)
 
          0.813
Acin_0278
Hypothetical protein (199 aa)
 
        0.797
Acin_0281
Formiminotetrahydrofolate cyclodeaminase (206 aa)
 
        0.745
Acin_1049
Amidohydrolase (382 aa)
   
   
  0.705
speB
Agmatinase (321 aa)
   
   
  0.438
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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