STRINGSTRING
oadB protein (Acidaminococcus intestini) - STRING interaction network
"oadB" - Glutaconate CoA transferase subunit B in Acidaminococcus intestini
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oadBGlutaconate CoA transferase subunit B (376 aa)    
Predicted Functional Partners:
mmdC
glutaconyl-CoA decarboxylase subunit gamma (145 aa)
 
 
  0.981
Acin_0296
glutaconyl-CoA decarboxylase subunit delta (108 aa)
       
    0.903
Acin_2034
Gamma-aminobutyrate metabolism dehydratase/isomerase (473 aa)
         
    0.900
crt
enoyl-CoA hydratase/carnithine racemase (262 aa)
         
    0.900
Acin_0318
glutaconyl-CoA decarboxylase subunit alpha (586 aa)
       
    0.869
pccB
Carboxyl transferase (508 aa)
              0.639
Acin_0943
Oxaloacetate decarboxylase (425 aa)
   
  0.573
Acin_0174
Oxaloacetate decarboxylase (463 aa)
   
  0.536
Acin_1086
Pyruvate carboxylase subunit B (461 aa)
   
  0.522
korD
2-oxoglutarate ferredoxin oxidoreductase subunit delta (67 aa)
 
          0.444
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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