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Acin_0304 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0304" - Hypothetical protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0304Hypothetical protein (207 aa)    
Predicted Functional Partners:
Acin_0305
DNA repair protein radC (223 aa)
 
 
 
  0.922
Acin_0306
Cell shape determining protein mreB (344 aa)
   
        0.859
Acin_0307
Rod shape-determining protein mreC; Involved in formation and maintenance of cell shape (295 aa)
   
   
  0.851
mrdA
Penicillin-binding protein 2 (612 aa)
     
      0.851
Acin_1868
RNA methyltransferase (463 aa)
        0.849
Acin_0303
Hypothetical protein (89 aa)
              0.848
Acin_0302
Hypothetical protein (141 aa)
              0.840
rne
Ribonuclease E (468 aa)
 
        0.832
Acin_0301
Hypothetical protein (166 aa)
              0.821
Acin_0310
Rod shape-determining protein RodA (370 aa)
              0.816
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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