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mrdA protein (Acidaminococcus intestini) - STRING interaction network
"mrdA" - Penicillin-binding protein 2 in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrdAPenicillin-binding protein 2 (612 aa)    
Predicted Functional Partners:
Acin_0310
Rod shape-determining protein RodA (370 aa)
 
  0.996
Acin_0306
Cell shape determining protein mreB (344 aa)
 
 
  0.987
Acin_0307
Rod shape-determining protein mreC; Involved in formation and maintenance of cell shape (295 aa)
 
   
  0.976
ftsW
Rod shape-determining protein RodA (402 aa)
 
  0.973
murG
UDP-N-acetylglucosamine-LPS N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) (371 aa)
 
  0.973
Acin_1783
Cell shape determining protein mreB (346 aa)
 
 
  0.943
Acin_2079
Glycosyl transferase family protein (256 aa)
 
  0.875
Acin_0308
Hypothetical protein (168 aa)
              0.859
mrcA
Penicillin-binding protein (699 aa)
 
 
0.853
Acin_0304
Hypothetical protein (207 aa)
     
      0.851
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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