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Acin_0339 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_0339" - Peptidase S1/S6 in Acidaminococcus intestini
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_0339Peptidase S1/S6 (380 aa)    
Predicted Functional Partners:
Acin_2028
TPR-repeat protein (323 aa)
   
  0.942
Acin_2027
TPR-repeat protein (314 aa)
   
  0.942
Acin_2017
Hypothetical protein (315 aa)
   
  0.942
Acin_0804
ABC transporter (305 aa)
         
  0.937
msbA
ABC lipid A exporter (589 aa)
         
  0.937
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (210 aa)
     
    0.932
lysA
Diaminopimelate decarboxylase (424 aa)
     
 
    0.932
speC
Lysine decarboxylase (365 aa)
     
 
    0.932
Acin_0354
Serine/threonine protein kinase (649 aa)
     
  0.909
rlmH
Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (160 aa)
         
  0.897
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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