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rlmH protein (Acidaminococcus intestini) - STRING interaction network
"rlmH" - Hypothetical protein in Acidaminococcus intestini
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rlmHHypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (160 aa)    
Predicted Functional Partners:
Acin_0339
Peptidase S1/S6 (380 aa)
         
  0.897
Acin_0337
Beta-lactamase superfamily metal-dependent hydrolase (275 aa)
   
   
  0.849
Acin_0341
Hypothetical protein (270 aa)
              0.829
Acin_0338
Hypothetical protein (240 aa)
              0.787
rsfS
Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (120 aa)
   
   
  0.675
rlmN
Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (352 aa)
   
   
  0.667
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (212 aa)
 
   
  0.639
rsmG
Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA (242 aa)
 
   
  0.578
Acin_0342
Hypothetical protein (368 aa)
              0.551
citC
Ligase; Acetylation of prosthetic group (2-(5’’-phosphoribosyl)- 3’-dephosphocoenzyme-A) of the gamma subunit of citrate lyase (350 aa)
              0.540
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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